Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000118.1 Hibiscus syriacus cultivar Beakdansim tig00000213_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59370

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1349--1387
20
2.0
20
84
0
51
33
33
12
20
1.91
1407--1494
45
1.9
46
88
2
133
27
23
18
30
1.97
8963--9006
21
2.1
21
82
0
52
9
43
15
31
1.79
10088--10145
26
2.2
26
100
0
116
27
24
15
32
1.95
10212--10534
160
2.0
160
97
0
610
28
23
17
31
1.97
13713--13767
19
2.9
19
76
12
60
20
20
9
50
1.74
15767--15838
36
2.0
36
88
0
108
31
25
18
25
1.97
27156--27317
62
2.9
55
74
16
161
41
6
4
46
1.52
31417--31449
9
3.7
9
88
11
50
54
0
0
45
0.99
35690--35730
8
5.2
8
82
5
57
34
0
29
36
1.58
35801--36173
128
2.9
128
93
0
631
23
24
20
31
1.98
36574--36673
33
3.0
34
83
2
139
39
3
4
54
1.35
37196--37286
21
4.3
20
85
9
110
19
25
35
19
1.96
37193--37286
42
2.2
42
86
3
136
21
25
34
19
1.96
37290--37337
21
2.3
21
88
0
69
25
12
37
25
1.91
39059--39137
33
2.4
34
83
8
101
60
1
0
37
1.05
42354--42395
22
1.9
22
90
9
68
14
11
4
69
1.34
47046--47086
22
1.9
21
90
5
64
14
12
4
68
1.36
51718--51780
2
31.5
2
100
0
126
49
0
0
50
1.00

Tables:   1

The End!