Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001181.1 Hibiscus syriacus cultivar Beakdansim tig00002347_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85817

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43944--43973
8
3.8
8
95
0
51
73
0
3
23
0.98
45938--45962
2
12.5
2
100
0
50
48
0
0
52
1.00
47950--48022
30
2.4
30
95
0
128
30
24
20
24
1.99
48005--48163
31
5.2
30
83
10
187
31
20
19
28
1.97
48008--48163
63
2.5
61
83
5
197
32
20
18
28
1.96
49654--49698
21
2.1
21
87
0
63
15
24
28
31
1.96
53127--53223
30
3.2
30
88
0
131
31
25
19
22
1.98
53182--53340
31
5.2
30
82
7
176
32
20
18
28
1.96
53185--53340
63
2.5
61
82
5
188
33
20
17
28
1.95
54850--54894
21
2.1
21
87
0
63
15
24
28
31
1.96
56320--56370
2
25.5
2
100
0
102
50
0
0
49
1.00
64346--64374
13
2.2
13
100
0
58
58
0
0
41
0.98
67654--67820
60
2.8
60
81
3
176
41
4
16
37
1.68
75273--75312
21
1.9
21
89
0
62
40
2
5
52
1.37
83505--83557
18
2.8
19
81
18
74
11
9
15
64
1.50

Tables:   1

The End!