Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001183.1 Hibiscus syriacus cultivar Beakdansim tig00002350_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80293

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3406--3530
49
2.5
51
90
6
211
34
5
12
47
1.65
3438--3527
19
4.1
20
68
30
58
35
4
13
46
1.63
3458--3512
30
1.9
29
85
10
78
34
3
14
47
1.62
3488--3525
20
1.9
20
94
0
67
36
5
13
44
1.66
10438--10477
20
2.0
21
90
5
64
35
5
15
45
1.68
19809--19969
80
2.0
80
97
0
304
40
19
16
23
1.91
27936--27979
21
2.1
21
91
0
70
31
27
25
15
1.96
29416--29633
103
2.1
103
98
0
427
26
13
23
36
1.92
29645--29763
23
5.3
23
78
2
125
23
25
23
27
2.00
29645--29755
46
2.4
46
95
0
195
23
27
24
25
2.00
33499--33542
21
2.1
21
86
0
61
29
27
27
15
1.96
34980--35195
101
2.1
102
98
1
416
26
13
23
36
1.92
35207--35314
46
2.3
46
96
0
198
23
26
23
26
2.00
35207--35314
23
4.7
23
80
0
126
23
26
23
26
2.00
41978--42002
6
4.2
6
100
0
50
64
0
0
36
0.94
46030--46089
19
3.2
19
81
11
70
46
0
1
51
1.10

Tables:   1

The End!