Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001188.1 Hibiscus syriacus cultivar Beakdansim tig00002357_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65765

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
709--743
17
2.1
17
100
0
70
54
17
11
17
1.71
8250--8304
20
2.8
20
94
0
101
25
18
21
34
1.96
16116--16155
18
2.2
19
90
4
64
47
10
2
40
1.50
16409--16459
13
3.8
13
86
2
66
56
0
1
41
1.10
16885--16952
35
1.9
35
90
0
109
47
8
1
42
1.43
21391--21473
38
2.2
37
83
10
98
67
1
8
22
1.25
21391--21473
37
2.2
37
83
10
98
67
1
8
22
1.25
22482--22558
35
2.3
35
82
6
97
41
1
0
57
1.07
24777--24898
46
2.6
47
82
3
138
35
11
9
43
1.74
28697--28759
2
31.5
2
100
0
126
50
0
0
49
1.00
28759--28783
2
12.5
2
100
0
50
52
0
48
0
1.00
32762--32801
20
2.0
20
85
9
55
45
0
5
50
1.23
43151--43192
16
2.6
16
92
0
75
40
7
28
23
1.81
58748--58805
20
2.7
20
86
10
71
27
22
18
31
1.97
61791--61841
12
4.1
12
74
18
50
66
9
9
13
1.44

Tables:   1

The End!