Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001197.1 Hibiscus syriacus cultivar Beakdansim tig00002371_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51409

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2014--2232
36
6.2
35
76
14
186
27
19
12
40
1.87
1927--2202
101
2.7
101
92
1
446
29
19
11
39
1.87
2245--2336
33
2.7
34
93
1
150
39
17
9
33
1.83
5493--5545
13
4.1
13
72
18
56
66
1
1
30
1.13
5541--5593
21
2.7
20
85
5
63
62
0
0
37
0.96
9177--9232
29
1.9
29
89
7
87
23
5
7
64
1.40
12923--12958
16
2.2
17
90
5
56
25
2
0
72
0.98
13210--13245
2
18.0
2
100
0
72
50
0
0
50
1.00
16712--16755
21
2.1
21
82
0
52
34
13
0
52
1.41
16727--16760
7
4.9
7
92
0
50
29
5
0
64
1.17
24555--25713
105
11.0
105
94
0
1888
32
25
18
23
1.97
27393--27430
11
3.5
11
85
3
51
26
0
2
71
1.00
27385--27430
16
2.8
16
83
9
58
26
2
2
69
1.11
27666--27709
2
22.0
2
95
0
79
47
0
2
50
1.13
29887--29968
29
2.8
29
92
1
128
31
14
10
42
1.81
34649--34730
29
2.8
29
90
1
128
34
13
9
42
1.77
35279--35318
19
2.1
19
100
0
80
32
5
10
52
1.56
36488--36561
29
2.5
30
79
16
93
52
5
13
28
1.62
41518--41587
23
3.0
23
97
0
131
22
12
24
40
1.89
42934--43021
31
2.7
31
77
10
97
27
22
32
17
1.96
44431--44525
18
5.3
18
76
12
97
68
0
10
21
1.19
44431--44532
53
1.9
52
90
2
159
67
0
9
22
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47182--47214
11
3.0
11
90
0
57
81
6
0
12
0.85
47957--48079
63
1.9
63
84
12
162
29
21
18
30
1.97

Tables:   1

The End!