Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001199.1 Hibiscus syriacus cultivar Beakdansim tig00002373_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62197

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9916--10518
256
2.4
261
90
4
944
26
12
19
41
1.87
10522--10604
42
2.0
43
92
2
141
6
22
39
31
1.78
10923--10968
17
2.7
17
86
10
67
28
30
8
32
1.87
12959--12991
16
2.1
16
100
0
66
12
33
24
30
1.91
24166--24213
22
2.1
24
88
7
73
39
4
12
43
1.62
27379--27415
6
6.2
6
87
0
56
32
45
16
5
1.70
33289--33332
6
7.3
6
100
0
88
34
47
18
0
1.49
38178--38264
29
3.0
29
87
0
129
17
39
27
16
1.90
38273--38357
10
8.3
10
73
19
77
22
51
16
9
1.72
38243--38325
40
2.1
40
84
8
107
21
49
16
12
1.78
38269--38377
30
3.6
30
95
4
200
22
51
15
10
1.73
39016--39059
21
2.1
21
91
0
70
29
0
15
54
1.42
42142--42173
11
2.9
11
90
0
55
34
0
6
59
1.23
42164--43003
14
59.3
14
69
21
293
41
1
9
47
1.47
42191--42255
19
3.7
19
74
19
77
41
1
10
46
1.48
42174--42271
33
3.0
33
98
0
187
41
3
10
44
1.53
42199--42529
25
12.9
25
71
19
112
41
2
9
46
1.49
42417--42481
19
3.7
19
74
19
77
41
1
10
46
1.48
42403--42497
33
2.9
33
98
0
181
42
3
9
45
1.52
42116--42597
226
2.1
226
98
0
928
41
2
9
47
1.48
42551--42878
26
13.2
26
72
16
178
42
0
9
47
1.43
42753--42825
8
9.2
8
70
24
57
41
1
9
47
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42747--43022
33
7.7
34
71
17
175
42
2
8
46
1.46
42967--43022
20
3.0
20
80
12
66
46
3
7
42
1.48
45157--45196
15
2.7
15
84
3
55
60
7
0
32
1.25
45247--45328
34
2.5
34
84
9
100
48
12
0
39
1.41
45388--45498
41
2.6
41
78
13
118
47
11
0
40
1.40
45561--45599
16
2.3
18
86
8
55
56
5
0
38
1.22
45917--46011
29
3.3
29
92
0
154
24
32
29
13
1.93
45998--46079
32
2.6
32
100
0
164
9
36
26
26
1.88
46134--46176
20
2.3
18
92
8
68
16
23
27
32
1.96
46177--46265
29
3.1
29
98
0
169
19
28
28
24
1.98
53309--53419
48
2.3
48
73
3
116
54
8
9
28
1.60

Tables:   1

The End!