Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001201.1 Hibiscus syriacus cultivar Beakdansim tig00002376_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69097

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3501--3614
59
1.9
59
82
1
140
32
14
18
34
1.92
4099--4147
22
2.1
24
88
7
75
44
0
6
48
1.27
5584--5617
16
2.1
16
88
0
50
29
0
5
64
1.17
5689--5912
112
2.1
109
89
5
346
37
7
9
46
1.64
7367--7421
27
2.0
27
96
0
101
23
23
23
29
1.99
15912--15966
27
2.0
27
89
6
85
25
20
25
29
1.99
16198--16240
20
2.2
20
86
0
59
37
20
11
30
1.89
25247--25304
20
2.7
20
81
10
62
32
18
20
27
1.97
27167--27203
19
1.9
19
94
0
65
45
2
0
51
1.15
35916--35946
2
15.5
2
100
0
62
48
0
0
51
1.00
39702--39763
29
2.1
29
87
0
88
33
9
11
45
1.73
39589--40018
142
3.0
140
85
4
571
34
10
10
43
1.75
39842--39905
29
2.2
29
94
0
110
37
6
7
48
1.57
40105--40142
19
2.0
19
90
10
60
36
0
2
60
1.11
44369--44512
8
18.0
8
96
0
243
25
9
25
40
1.84
53911--53949
18
2.2
18
85
0
51
35
30
25
7
1.84
55874--56030
64
2.5
64
78
14
171
34
19
19
26
1.96
56389--56422
12
2.8
12
100
0
68
32
0
26
41
1.56
56421--56491
29
2.4
29
97
2
133
45
16
21
16
1.86
62716--62866
64
2.4
63
79
10
175
35
19
17
27
1.94
63252--63331
29
2.8
28
90
5
117
45
17
20
17
1.86
64872--64909
10
3.6
11
82
10
53
73
5
0
21
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66053--66106
25
2.2
25
86
0
72
55
0
0
44
0.99
66368--66550
21
9.1
21
77
13
106
31
22
22
22
1.98
66387--66538
40
3.8
38
79
8
144
33
20
23
22
1.97
66388--66539
59
2.6
59
83
8
202
34
20
23
21
1.97
66384--66538
19
7.8
19
77
11
109
33
20
23
21
1.97
67278--67444
21
7.8
21
78
13
173
37
22
19
19
1.94
67274--67453
42
4.3
42
90
3
281
37
23
19
20
1.94
67278--67444
86
2.0
85
95
1
298
37
22
19
19
1.94
67526--67588
19
3.3
19
100
0
126
20
22
26
30
1.98
68612--68664
23
2.2
24
86
6
81
7
5
32
54
1.52

Tables:   1

The End!