Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001220.1 Hibiscus syriacus cultivar Beakdansim tig00002409_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61900

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5457--5493
17
2.2
16
95
4
65
0
45
0
54
1.00
10805--10934
70
1.9
70
83
4
174
22
16
21
39
1.92
11493--11568
30
2.6
30
73
21
70
52
3
22
21
1.63
14667--14691
2
12.5
2
100
0
50
52
0
0
48
1.00
15051--15115
28
2.3
28
100
0
130
50
10
10
27
1.70
26282--26309
8
3.5
8
100
0
56
39
0
10
50
1.37
29827--29856
9
3.4
9
95
4
53
90
0
0
10
0.47
29821--29873
8
6.5
8
87
10
63
81
0
7
11
0.88
30796--31296
55
9.1
55
94
0
835
32
16
23
27
1.96
34267--34298
13
2.5
13
89
0
55
0
28
0
71
0.86
35786--35924
32
4.4
32
72
11
108
28
18
19
33
1.95
39948--40023
32
2.4
32
86
0
98
34
14
18
32
1.91
43604--43637
2
17.0
2
100
0
68
50
0
0
50
1.00
50659--50916
129
2.0
129
98
0
498
36
16
10
36
1.84
54077--54198
65
1.9
65
83
6
158
27
18
22
31
1.97
55616--55653
18
2.1
18
90
0
58
47
5
28
18
1.70
57150--57365
102
2.1
102
95
1
389
26
13
23
37
1.92
57389--57444
23
2.4
23
87
0
76
19
26
25
28
1.99

Tables:   1

The End!