Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001225.1 Hibiscus syriacus cultivar Beakdansim tig00002414_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52761

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1778--1844
33
2.0
34
82
2
82
64
5
10
19
1.45
2535--2583
21
2.3
21
78
0
62
2
4
28
65
1.22
3015--3045
14
2.2
14
94
0
53
77
0
0
22
0.77
3093--3161
36
2.0
36
88
5
106
46
5
0
47
1.26
3085--3263
37
4.8
38
73
6
145
45
5
2
46
1.39
3343--3427
38
2.2
40
81
12
106
44
5
4
44
1.49
3412--3440
2
15.0
2
92
7
51
48
0
0
51
1.00
3299--3426
37
3.6
36
77
15
115
46
7
4
41
1.52
8925--8978
2
27.0
2
100
0
108
50
0
0
50
1.00
22933--23147
73
2.8
79
81
11
266
35
12
18
33
1.89
39688--39886
29
7.0
29
82
5
192
31
1
16
50
1.54
46987--47031
7
6.4
7
80
10
56
13
37
26
22
1.91
46982--47023
21
2.0
21
100
0
84
14
42
23
19
1.87
47032--47178
29
5.1
29
76
14
133
31
1
17
49
1.55
47033--47201
57
3.0
55
72
16
139
31
2
15
50
1.56

Tables:   1

The End!