Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001233.1 Hibiscus syriacus cultivar Beakdansim tig00002428_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33998

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2352--2493
64
2.2
64
82
9
166
25
17
24
32
1.97
8699--8754
29
1.9
29
96
0
103
26
1
17
53
1.54
10108--10257
42
3.6
43
79
8
157
21
18
22
38
1.94
10117--10247
43
3.1
42
83
6
149
22
19
21
36
1.95
11547--11626
36
2.3
35
93
6
144
25
12
18
43
1.85
19240--19355
42
2.8
42
85
8
141
32
22
17
27
1.96
20705--20889
41
4.5
41
81
6
187
30
15
15
38
1.89
20728--20907
83
2.2
81
81
7
193
32
16
15
35
1.91
20913--21049
41
3.3
38
72
17
114
26
20
18
35
1.95
20896--21054
82
1.9
83
87
3
232
26
20
18
35
1.95
20915--21056
42
3.5
39
74
14
117
24
19
19
36
1.95
21020--21098
41
1.9
42
82
7
99
29
22
17
30
1.97
21010--21110
41
2.4
42
77
4
98
28
19
19
31
1.97
22497--22583
43
2.0
43
84
4
113
37
5
6
49
1.54
24178--24219
18
2.3
18
84
8
50
61
4
7
26
1.42

Tables:   1

The End!