Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001235.1 Hibiscus syriacus cultivar Beakdansim tig00002430_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53565

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3432--3456
13
1.9
13
100
0
50
80
0
4
16
0.87
8880--8921
18
2.3
18
84
8
50
59
7
7
26
1.50
14338--14366
2
14.5
2
100
0
58
48
0
0
51
1.00
15145--15178
16
2.1
17
88
5
52
35
0
20
44
1.52
19497--19633
71
1.9
72
88
4
206
40
7
8
43
1.62
25012--25280
136
2.0
134
93
2
459
45
6
1
46
1.39
26324--26380
29
2.0
29
96
0
105
14
33
31
21
1.92
26438--26552
29
4.0
29
91
0
194
13
33
30
21
1.93
26589--26621
14
2.4
14
94
0
57
6
30
39
24
1.79
26664--26721
29
2.0
29
86
0
80
24
22
34
18
1.96
29810--29865
24
2.2
27
81
12
73
57
1
0
41
1.09
29848--29904
13
4.5
13
70
16
57
63
1
0
35
1.05
30002--30031
16
1.9
15
93
6
51
46
0
3
50
1.18
34244--34739
251
2.0
249
93
2
852
31
27
16
24
1.96
35110--35163
16
3.3
16
82
10
65
57
1
1
38
1.20
35090--35162
21
3.7
18
73
25
51
60
1
1
36
1.14
35114--35153
17
2.4
16
87
4
53
55
2
2
40
1.27
37818--37860
19
2.3
19
83
0
59
9
25
48
16
1.75
43411--43482
35
2.0
37
91
5
121
41
16
13
27
1.87
44038--44107
15
4.6
16
72
21
53
21
5
1
71
1.15
44019--44130
57
2.0
56
80
5
127
22
7
1
68
1.23
46160--46192
14
2.4
14
90
10
50
9
21
48
21
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46184--46223
19
2.1
19
90
0
62
25
22
25
27
2.00
49457--49484
14
2.0
14
100
0
56
21
42
28
7
1.79
49471--49523
19
2.7
20
85
5
81
28
33
28
9
1.88
49593--49673
29
2.8
29
90
0
126
19
33
35
11
1.87
49675--49754
40
2.0
40
95
0
142
20
25
25
30
1.99
49758--49783
12
2.2
12
100
0
52
23
7
42
26
1.81
49794--49869
29
2.6
29
89
4
118
22
23
34
19
1.97
52160--52227
31
2.2
31
86
7
93
54
2
1
41
1.24
53001--53033
2
16.5
2
100
0
66
51
0
0
48
1.00
53228--53252
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!