Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001242.1 Hibiscus syriacus cultivar Beakdansim tig00002443_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  235367

Tables:   1   2   

This is table  2  of  2  ( 136 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
220497--220718
46
4.8
46
91
0
345
24
23
8
43
1.81
221180--221237
22
2.8
20
82
10
71
27
29
15
27
1.96
221113--221288
95
1.9
95
85
0
244
26
25
15
32
1.96
221113--221309
95
2.1
94
82
5
236
25
25
15
32
1.96
225246--225300
20
2.7
21
88
5
76
52
16
10
20
1.73
227325--227579
26
10.7
26
72
17
189
22
21
9
46
1.79
227291--227579
46
6.2
46
84
5
346
23
21
8
45
1.80
227325--227552
72
3.2
70
74
15
214
22
21
9
46
1.80
227291--227579
144
2.1
138
83
6
357
23
21
8
45
1.80
227448--227572
20
5.7
20
68
23
72
21
24
8
45
1.80
227928--228116
95
2.0
95
84
2
245
25
25
15
33
1.95
233852--233984
46
2.9
46
85
6
171
22
17
12
48
1.80
233910--233982
22
3.2
22
65
14
58
24
19
12
43
1.85
234026--234851
81
10.4
81
81
4
878
30
20
12
36
1.90
234065--234829
319
2.4
315
81
6
898
29
20
12
36
1.90
234041--234797
400
1.9
396
83
6
983
29
20
12
37
1.90

Tables:   1   2

The End!