Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001246.1 Hibiscus syriacus cultivar Beakdansim tig00002448_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86982

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
814--897
30
2.8
30
85
0
105
21
9
9
59
1.57
7779--7816
3
13.3
3
89
10
62
34
0
0
65
0.93
7780--7813
11
3.1
11
91
8
52
35
0
0
64
0.94
7779--7818
14
2.9
14
100
0
80
35
0
0
65
0.93
9228--9294
28
2.4
28
80
7
73
44
4
5
44
1.48
9402--9458
30
1.9
30
96
0
105
59
3
8
28
1.44
14615--14838
111
2.1
105
82
6
270
38
4
3
52
1.40
17997--18053
25
2.3
25
84
6
71
40
17
21
21
1.92
18009--18067
25
2.5
23
89
8
84
44
18
15
22
1.87
18007--18057
25
2.0
25
96
0
93
43
15
17
23
1.88
27370--27398
13
2.1
14
93
6
51
34
24
27
13
1.93
35304--35353
26
1.9
26
84
8
66
14
14
0
72
1.14
45869--46602
81
9.1
81
89
1
1087
34
11
22
31
1.89
51173--51988
81
10.1
81
88
0
1150
31
22
10
35
1.88
51173--51988
323
2.5
323
89
0
1209
31
22
10
35
1.88
63754--63807
26
2.0
27
82
10
67
48
9
3
38
1.53
85141--85213
29
2.5
30
81
2
94
43
6
20
28
1.77
86635--86664
13
2.4
13
94
5
53
40
0
6
53
1.27

Tables:   1

The End!