Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001247.1 Hibiscus syriacus cultivar Beakdansim tig00002449_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42253

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1303--1347
22
2.0
23
95
4
83
31
13
26
28
1.94
1754--1902
78
1.9
78
93
2
255
35
10
27
26
1.89
1841--2091
45
5.6
45
82
6
253
39
9
21
28
1.86
2770--2814
15
2.9
16
80
3
56
51
0
22
26
1.49
14245--14287
22
2.0
22
90
0
68
30
16
32
20
1.95
14427--14475
20
2.5
20
86
0
62
28
12
26
32
1.92
16084--16132
21
2.3
21
100
0
98
20
0
12
67
1.22
28022--28054
16
2.1
16
88
5
50
54
6
12
27
1.60
31094--31182
46
2.0
45
90
2
142
25
16
26
30
1.97
40891--40972
41
2.0
41
97
0
155
30
14
35
19
1.92
41797--41838
20
2.0
21
86
4
59
47
0
0
52
1.00
41985--42031
19
2.5
19
83
10
53
48
0
2
48
1.13

Tables:   1

The End!