Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001248.1 Hibiscus syriacus cultivar Beakdansim tig00002450_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51833

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3934--3990
8
6.9
8
88
7
87
0
26
0
73
0.83
3935--3992
26
2.2
26
93
0
98
0
24
0
75
0.80
3934--3990
17
3.4
17
90
2
89
0
26
0
73
0.83
6813--6850
8
4.9
8
96
3
69
52
13
21
13
1.73
14935--15015
21
3.8
21
82
7
83
22
35
24
17
1.95
14933--14994
20
2.9
21
88
7
81
20
35
25
17
1.95
19924--19962
3
13.0
3
88
0
60
61
0
0
38
0.96
19924--19962
15
2.6
15
100
0
78
61
0
0
38
0.96
20291--20554
131
2.0
131
87
4
381
34
12
25
27
1.92
23802--23841
19
2.2
18
86
4
53
15
32
32
20
1.93
23825--23875
23
2.3
23
93
3
86
21
21
37
19
1.95
30560--30660
44
2.3
45
89
3
152
32
15
19
31
1.94
30580--30657
24
3.4
24
72
13
83
34
14
19
32
1.91
37695--37720
2
13.0
2
100
0
52
50
0
0
50
1.00
46300--46390
21
4.4
19
74
17
65
39
2
2
56
1.24
46275--46354
2
40.5
2
81
16
96
43
1
3
51
1.27
50099--50136
20
1.9
20
94
0
67
57
5
18
18
1.58
50104--50144
20
2.0
20
85
0
55
56
4
21
17
1.60

Tables:   1

The End!