Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001252.1 Hibiscus syriacus cultivar Beakdansim tig00002456_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73798

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
852--903
21
2.5
21
90
0
77
26
21
28
23
1.99
7943--7981
20
2.0
20
89
0
60
46
12
15
25
1.81
8884--8993
31
3.4
31
68
16
87
20
20
21
38
1.94
9780--9936
75
2.1
76
95
1
280
42
18
16
22
1.89
22437--22508
22
3.2
22
79
11
67
72
0
13
13
1.13
22466--22508
22
1.9
22
90
4
68
76
0
9
13
1.01
22521--22666
4
33.2
4
73
17
80
71
1
4
21
1.12
22459--22666
8
23.9
8
67
19
71
72
1
6
19
1.17
22470--22576
10
10.9
10
71
13
53
74
1
7
15
1.12
22736--22776
20
2.0
20
86
9
57
80
2
4
12
0.97
22735--22785
24
2.1
24
85
7
68
78
1
3
15
0.99
22574--22785
116
1.8
116
80
9
254
69
2
6
21
1.23
23947--24018
2
38.0
2
85
10
98
52
0
0
47
1.00
27284--27353
2
36.5
2
87
8
83
51
0
2
45
1.16
27800--27858
21
2.8
21
94
0
100
38
8
3
49
1.50
29186--29273
46
1.9
45
84
11
117
25
19
1
54
1.51
32229--32265
18
2.1
19
85
10
51
43
13
5
37
1.67
33943--33999
23
2.5
22
83
8
69
68
7
10
14
1.38
33963--34030
33
2.1
33
91
2
111
70
7
5
16
1.30
33971--34066
33
2.9
32
86
6
113
67
7
5
19
1.34
33984--34083
32
3.1
32
84
7
105
67
6
6
21
1.35
34504--34571
20
3.2
20
69
18
57
38
7
8
45
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42924--43054
47
2.7
47
81
4
147
32
24
12
31
1.92
43158--43650
54
9.1
54
88
2
681
36
18
12
32
1.89
53080--53110
2
15.5
2
100
0
62
48
0
0
51
1.00
54901--54988
46
1.9
46
90
0
140
23
18
12
45
1.83
55342--55928
54
10.8
54
86
1
780
29
17
21
31
1.96
55342--55929
218
2.7
217
87
2
806
29
17
21
30
1.96
56115--56150
18
2.0
18
100
0
72
44
27
11
16
1.82
56286--56363
22
3.6
22
69
19
65
26
24
14
34
1.93
58501--58627
47
2.6
49
90
2
186
31
25
13
29
1.94
58729--59331
54
11.2
54
90
2
874
37
17
12
32
1.88
59702--59749
19
2.5
19
93
0
87
22
22
12
41
1.88
60984--61030
23
2.1
23
84
11
62
23
0
21
55
1.44
67465--67502
20
1.9
20
94
0
67
31
34
10
23
1.89
71445--71485
15
2.7
15
100
0
82
41
4
0
53
1.22
71439--71480
15
2.5
18
74
22
54
45
7
0
47
1.30

Tables:   1

The End!