Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001254.1 Hibiscus syriacus cultivar Beakdansim tig00002464_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78058

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8840--8875
11
3.3
11
88
0
54
50
0
0
50
1.00
8840--8875
5
6.5
6
87
12
51
50
0
0
50
1.00
24116--24151
2
18.0
2
100
0
72
50
0
0
50
1.00
25701--25817
51
2.3
51
92
1
191
17
32
30
19
1.95
25808--25861
25
2.2
25
96
0
99
24
24
33
18
1.97
25854--25972
49
2.5
48
89
5
179
25
25
22
26
2.00
31396--31622
110
2.1
111
91
0
366
46
8
8
36
1.65
31729--31769
10
4.1
10
84
12
57
39
0
29
31
1.57
31849--31967
50
2.4
51
79
13
131
18
32
30
18
1.95
31880--32006
51
2.5
50
84
3
157
18
29
34
17
1.94
33359--33391
14
2.3
15
89
5
50
15
15
42
27
1.86
35532--35565
16
2.1
16
94
0
59
32
8
26
32
1.87
36315--36347
15
2.1
16
88
5
50
51
15
24
9
1.72
40793--40839
24
1.9
25
86
4
69
44
0
2
53
1.12
46609--46644
17
2.1
17
89
0
54
44
11
5
38
1.63
49014--49058
19
2.4
19
100
0
90
26
13
35
24
1.92
49607--49650
20
2.3
19
81
11
54
22
25
6
45
1.77
50466--50541
30
2.7
29
83
6
84
50
7
10
31
1.66
56682--56761
41
2.0
41
94
0
142
36
25
23
15
1.93

Tables:   1

The End!