Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001256.1 Hibiscus syriacus cultivar Beakdansim tig00002467_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82059

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5597--5659
23
2.6
22
80
14
63
15
4
71
7
1.27
9128--9188
24
2.6
25
78
17
69
44
0
0
55
0.99
9518--9578
2
30.5
2
100
0
122
50
0
0
49
1.00
9832--9866
16
2.2
16
89
0
52
57
8
14
20
1.63
10866--11168
155
2.0
155
97
0
570
23
18
16
41
1.90
13321--13369
23
2.2
21
82
7
62
36
2
6
55
1.37
24920--24946
2
13.5
2
100
0
54
48
0
0
51
1.00
45745--45795
15
3.4
15
75
0
57
31
3
9
54
1.51
52698--52791
30
3.1
30
84
3
109
35
27
20
17
1.94
52739--52824
31
2.8
31
85
1
102
34
23
17
24
1.96
52751--52846
31
3.1
31
78
3
104
36
20
16
26
1.94
54017--54177
64
2.5
62
83
8
180
27
21
18
33
1.96
55156--55197
20
2.2
19
86
4
57
14
26
0
59
1.35
57265--57359
31
3.1
31
74
8
95
35
22
16
25
1.95
58488--58648
64
2.5
62
84
8
189
26
21
18
34
1.96
60101--60153
22
2.4
22
90
0
88
18
16
26
37
1.93
60759--60793
6
6.0
6
96
3
63
0
17
51
31
1.45
60877--60983
19
5.5
19
82
6
133
40
18
21
19
1.92
60877--61024
41
3.7
39
81
8
147
39
20
21
18
1.92
60877--61024
79
1.9
79
91
4
244
39
20
21
18
1.92
60996--61092
20
4.8
20
82
2
122
40
23
21
14
1.90
60930--61086
61
2.6
61
78
10
162
40
21
21
16
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64504--64574
2
35.5
2
97
0
133
49
0
1
49
1.09
64657--64696
2
20.0
2
100
0
80
50
0
0
50
1.00
69930--70098
53
3.2
53
89
1
241
23
26
21
28
1.99
70458--70544
42
2.1
41
87
4
122
34
24
16
25
1.95
70592--71160
42
13.0
42
64
17
210
28
23
18
29
1.98
70454--70753
122
2.5
122
88
1
442
31
21
18
29
1.97
70602--70665
20
3.0
21
70
17
69
31
25
18
25
1.98
70661--70844
93
2.0
93
95
0
332
28
22
17
32
1.96
70828--70888
20
3.0
20
71
17
61
29
24
22
22
1.99
70711--71158
135
3.3
135
94
0
779
28
23
18
29
1.98
70817--70880
20
3.0
21
68
17
60
31
26
18
23
1.98
70876--70900
13
1.9
13
100
0
50
24
20
24
32
1.98
71087--71150
20
3.0
21
70
17
69
31
25
17
26
1.97
71096--71194
22
4.7
21
75
17
107
29
25
20
25
1.99
71090--71194
42
2.5
41
86
9
124
29
24
20
25
1.99

Tables:   1

The End!