Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001257.1 Hibiscus syriacus cultivar Beakdansim tig00002474_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66199

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11459--11514
2
28.0
2
96
0
103
50
0
1
48
1.11
14662--14705
21
2.2
20
83
4
52
52
2
0
45
1.13
14659--14995
186
1.8
184
91
2
559
41
2
8
46
1.49
15477--15509
12
2.8
12
90
4
50
45
27
3
24
1.68
18385--18503
44
2.7
44
93
0
193
19
29
26
25
1.98
21382--21437
19
2.9
19
85
12
78
16
21
28
33
1.95
21382--21430
10
4.8
11
83
16
70
16
20
26
36
1.93
21383--21437
9
5.6
10
83
12
78
14
21
29
34
1.93
21450--21504
13
3.8
13
76
21
56
16
47
20
16
1.83
21458--21498
18
2.3
18
100
0
82
17
51
21
9
1.74
28597--28652
19
2.9
19
85
12
78
16
21
28
33
1.95
28597--28645
10
4.8
11
83
16
70
16
20
26
36
1.93
28598--28652
9
5.6
10
83
12
78
14
21
29
34
1.93
28665--28719
13
3.8
13
76
21
56
16
47
20
16
1.83
28673--28713
18
2.3
18
100
0
82
17
51
21
9
1.74
28727--28792
29
2.3
29
89
0
96
21
10
27
40
1.86
34038--34078
21
1.9
22
90
5
66
39
17
19
24
1.92
34663--34805
79
1.8
76
82
7
180
41
9
4
44
1.57
39865--40032
45
3.8
45
89
6
254
28
21
7
42
1.80
44346--44385
21
1.9
21
89
0
62
50
5
15
30
1.65
45830--45881
21
2.5
21
87
0
77
21
17
26
34
1.95
45772--45887
56
2.1
56
80
0
124
23
15
23
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50079--50118
21
1.9
21
89
0
62
55
7
7
30
1.56
56443--56484
22
1.9
22
95
0
75
21
33
26
19
1.97
57755--57811
19
3.1
18
77
10
62
26
5
0
68
1.11
58017--58093
19
4.1
19
96
0
145
14
25
6
53
1.65
58017--58086
10
7.3
10
71
9
65
12
25
5
55
1.59
63643--63689
20
2.6
17
75
18
58
29
17
27
25
1.97
63650--63700
20
2.5
20
90
0
75
31
17
21
29
1.96

Tables:   1

The End!