Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001262.1 Hibiscus syriacus cultivar Beakdansim tig00002480_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38225

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1788--1843
24
2.3
24
82
17
71
67
1
7
23
1.24
2971--3027
13
4.2
13
77
16
62
70
0
3
26
1.03
2974--3026
3
16.7
3
81
11
61
67
0
3
28
1.07
2981--3026
19
2.4
19
88
0
74
69
0
2
28
1.00
2973--3030
26
2.2
26
87
6
82
68
0
3
27
1.05
3084--3179
31
3.3
29
85
9
117
50
7
2
40
1.42
3145--3293
38
3.9
38
80
11
171
45
5
3
45
1.42
29083--29243
64
2.5
64
80
9
195
24
22
19
33
1.97
30255--30361
31
3.4
32
73
8
94
33
17
14
34
1.90
30256--30379
62
2.0
63
82
4
153
32
18
16
32
1.94
35659--35689
2
15.5
2
100
0
62
51
48
0
0
1.00
37930--37985
25
2.4
23
82
8
60
53
0
0
46
1.00
37939--37985
20
2.2
20
85
7
58
53
0
0
46
1.00

Tables:   1

The End!