Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001263.1 Hibiscus syriacus cultivar Beakdansim tig00002481_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77374

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196--224
14
2.1
14
93
6
51
0
24
0
75
0.80
591--628
2
20.0
2
89
10
62
47
0
0
52
1.00
771--796
2
13.0
2
100
0
52
50
0
0
50
1.00
1904--1969
29
2.2
31
81
5
82
31
3
3
62
1.26
1945--1998
22
2.5
22
90
3
92
31
0
0
68
0.90
1945--1997
11
4.9
11
77
9
56
30
0
0
69
0.88
2019--2088
30
2.4
29
82
15
83
47
17
5
30
1.70
6673--6823
75
2.1
72
96
3
275
43
7
10
37
1.69
10074--10110
16
2.3
17
86
9
51
37
5
5
51
1.48
21651--21966
160
2.0
157
93
1
542
35
17
19
27
1.94
28647--28682
18
2.0
18
100
0
72
22
5
16
55
1.62
29096--29187
3
29.0
3
79
8
94
4
31
1
63
1.21
29097--29187
19
4.9
19
84
7
109
4
30
1
63
1.21
29121--29191
25
2.9
24
82
17
92
2
30
0
66
1.06
35958--36045
31
2.9
31
84
5
108
38
10
10
40
1.73
38998--39025
14
2.0
14
100
0
56
50
7
0
42
1.30
41978--42002
13
1.9
13
100
0
50
40
8
8
44
1.63
42151--42187
17
2.2
17
100
0
74
43
10
0
45
1.39
44014--44067
23
2.5
22
82
11
58
24
27
25
22
2.00
44032--44078
23
2.1
23
92
4
78
21
23
34
21
1.97
44040--44089
22
2.2
23
82
3
57
22
28
24
26
1.99
56670--56735
20
3.3
20
81
12
73
40
1
1
56
1.18
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58842--58888
19
2.5
19
100
0
94
36
21
21
21
1.96
60605--60634
14
2.1
15
93
6
53
63
16
0
20
1.31
61172--61209
10
4.0
10
80
13
53
55
0
44
0
0.99
62011--62082
3
24.3
3
88
8
112
65
0
1
33
1.02
62019--62094
6
13.4
5
87
6
53
68
0
1
30
0.98
62330--62632
134
2.3
134
89
1
446
22
18
31
28
1.97
63242--63304
29
2.1
30
85
8
85
38
15
9
36
1.81
63242--63304
30
2.1
30
88
2
92
38
15
9
36
1.81
63161--63576
94
4.5
94
72
14
298
43
14
13
27
1.84
63273--63430
59
2.6
63
89
7
254
41
15
11
31
1.82
63398--63496
28
3.5
28
89
6
155
46
14
12
27
1.79
63398--63504
29
3.8
28
85
7
144
46
14
11
27
1.79
64973--65058
11
8.1
11
75
20
69
1
13
5
79
0.98
64977--65040
23
2.8
23
86
9
78
1
12
4
81
0.92
64973--65066
15
6.4
14
75
14
75
1
13
6
78
0.99
65015--65062
19
2.6
19
78
15
55
0
12
10
77
1.00
64983--65074
26
3.6
26
84
10
109
1
15
7
76
1.07
64954--65066
29
3.5
33
71
21
96
0
14
8
76
1.07
65000--65073
14
5.7
13
75
16
64
0
14
8
77
0.99
65627--65665
20
2.0
20
89
0
60
38
15
15
30
1.88
67952--67989
17
2.2
18
86
9
53
57
5
5
31
1.43
70340--70399
3
20.0
3
83
6
77
68
0
1
30
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72065--72103
19
2.0
20
90
5
62
25
0
20
53
1.45
75777--75850
28
2.5
30
73
10
80
33
9
16
40
1.80

Tables:   1

The End!