Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001264.1 Hibiscus syriacus cultivar Beakdansim tig00002482_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88041

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9378--9760
142
2.7
142
86
1
509
36
12
11
39
1.79
11146--11188
6
7.2
6
86
7
61
67
0
0
32
0.91
11400--11450
24
2.2
21
78
21
57
54
3
1
39
1.30
11390--11428
19
2.1
19
95
0
69
58
2
5
33
1.33
13668--13708
15
2.9
15
79
13
52
53
7
0
39
1.29
29369--29491
31
4.0
31
91
2
194
36
21
20
21
1.95
29965--30005
18
2.4
18
88
8
59
41
17
4
36
1.71
30358--30402
21
2.1
21
87
0
63
15
24
28
31
1.96
31516--31725
65
3.3
63
82
9
228
26
18
23
31
1.97
34228--34298
30
2.4
30
92
0
124
46
4
4
45
1.42
40329--40376
19
2.5
20
78
18
57
45
0
2
52
1.12
42483--42534
2
26.5
2
96
3
97
0
51
0
48
1.00
44572--44622
20
2.5
20
90
0
84
21
21
21
35
1.96
47662--47722
30
2.0
30
87
0
86
36
9
13
40
1.77
51446--51475
15
2.0
15
93
0
51
46
16
6
30
1.73
55523--55556
16
2.1
16
94
0
59
32
26
8
32
1.87
56005--56034
15
2.0
15
93
0
51
46
16
6
30
1.73
60305--60333
3
9.7
3
100
0
58
65
0
0
34
0.93
62332--62356
13
1.9
13
100
0
50
52
16
8
24
1.70
64201--64308
56
1.9
57
84
5
148
41
5
2
50
1.40
69130--69188
29
2.0
29
90
0
91
27
15
15
42
1.86
77888--77934
24
2.0
24
86
0
67
48
10
21
19
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79819--79846
14
2.0
14
100
0
56
35
14
14
35
1.86

Tables:   1

The End!