Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000127.1 Hibiscus syriacus cultivar Beakdansim tig00000227_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51848

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6027--6060
17
1.9
18
88
5
52
58
0
11
29
1.33
9597--9652
22
2.5
22
88
0
85
23
25
21
30
1.99
15929--15991
22
2.9
22
87
0
81
25
22
23
28
1.99
16775--17116
130
2.7
128
81
5
363
40
11
14
33
1.82
18187--18250
29
2.1
31
82
5
78
42
6
17
34
1.74
20301--20361
21
2.8
22
80
16
81
24
8
26
40
1.83
21714--21820
20
5.3
20
93
0
178
35
22
19
22
1.96
21829--21975
20
7.3
20
80
6
145
34
23
14
27
1.94
21794--21964
80
2.1
80
98
0
333
34
23
16
25
1.95
21774--21980
100
2.1
98
81
7
238
35
23
15
25
1.95
21829--22008
20
8.9
20
77
7
141
35
23
13
28
1.92
21794--22008
80
2.7
80
90
5
292
35
23
14
26
1.93
21992--22041
20
2.5
20
81
15
59
32
20
12
36
1.89
23786--23823
20
2.0
20
84
5
51
44
13
15
26
1.83
23794--23836
19
2.2
20
83
4
52
44
16
16
23
1.86
25821--25882
18
3.2
20
78
19
62
61
0
1
37
1.06
25877--26034
61
2.5
60
89
9
230
56
1
0
41
1.10
25943--26004
24
2.5
24
79
10
72
54
1
0
43
1.09
27093--27143
26
2.0
26
88
7
77
47
0
1
50
1.12
29546--29603
21
2.7
22
78
10
57
37
5
32
24
1.77
29563--29602
21
1.9
21
89
0
62
45
5
30
20
1.72
34175--34301
21
6.4
19
71
20
75
65
0
3
29
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34209--34375
29
5.8
28
67
18
76
64
1
3
29
1.20
34491--34537
23
2.0
23
84
15
62
70
0
2
27
0.99
35736--36794
106
10.1
106
88
3
1446
22
18
24
34
1.96
35736--36797
318
3.4
317
91
2
1617
22
18
24
34
1.96
37564--37640
22
3.5
22
92
0
127
20
14
25
38
1.91
38036--38381
171
2.0
175
92
3
585
26
17
19
36
1.94
38415--38487
8
9.7
7
75
21
60
0
15
6
78
0.96
38404--38455
25
2.2
25
86
6
72
0
19
5
75
1.01
41668--41712
23
2.0
23
86
0
63
26
28
24
20
1.99
41691--41994
149
2.0
149
98
0
581
35
20
16
27
1.94
42370--42406
19
1.9
20
88
5
58
62
0
35
2
1.10
47903--47946
22
2.0
22
86
0
61
27
27
25
20
1.99
48596--48632
19
1.9
20
88
5
58
62
0
35
2
1.10
50937--51000
10
5.8
12
79
17
59
68
0
1
29
0.99
50941--51026
22
3.9
21
78
14
75
65
0
4
30
1.13
50941--51005
23
2.9
22
74
17
62
69
0
3
27
1.03
50938--51059
26
5.3
22
68
27
60
65
0
4
28
1.19
51137--51193
30
1.9
31
85
7
82
64
0
5
29
1.15
51229--51274
22
2.0
23
88
12
69
71
0
2
26
0.97

Tables:   1

The End!