Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001274.1 Hibiscus syriacus cultivar Beakdansim tig00002502_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59741

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3306--3353
22
2.2
21
77
3
51
20
20
6
52
1.68
5963--6033
21
3.4
21
84
9
92
77
0
16
5
0.95
5961--6018
16
3.7
15
76
19
64
79
0
17
3
0.87
5963--6044
21
3.8
22
76
14
82
76
0
15
7
0.99
5986--6042
17
3.4
16
75
13
60
78
0
14
7
0.94
5963--6044
42
1.9
42
83
11
105
76
0
15
7
0.99
6011--6042
14
2.2
15
94
5
57
78
0
12
9
0.97
8220--8491
62
4.2
62
73
11
219
28
20
16
34
1.94
8236--8465
129
1.8
124
81
8
284
28
20
16
34
1.94
8531--9434
89
10.1
89
83
0
1056
30
19
20
29
1.97
9459--10234
82
9.4
82
79
4
785
36
20
17
24
1.94
10357--10402
3
15.0
3
95
4
83
34
0
0
65
0.93
10485--10526
18
2.3
18
87
0
57
28
38
26
7
1.82
30737--30816
33
2.4
35
81
8
94
33
17
7
41
1.78
30811--30860
17
2.9
17
81
0
55
36
14
6
44
1.69
34814--34851
17
2.2
18
85
4
51
34
13
10
42
1.78
34926--34976
17
3.0
17
82
0
66
35
15
7
41
1.76
40082--40131
26
1.9
26
95
0
91
36
18
4
42
1.69
48001--48045
21
2.1
21
83
0
54
28
20
20
31
1.97
52223--52267
3
15.0
3
95
0
72
33
4
0
62
1.15
59299--59355
2
30.0
2
89
10
93
49
0
0
50
1.00
59299--59355
11
5.0
12
87
12
93
49
0
0
50
1.00

Tables:   1

The End!