Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001280.1 Hibiscus syriacus cultivar Beakdansim tig00002514_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62352

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1983--2058
20
3.6
21
73
18
68
25
25
23
26
2.00
1983--2057
21
3.5
22
81
12
77
25
24
24
26
2.00
5105--5148
16
2.5
18
82
17
65
34
2
11
52
1.50
5116--5149
16
2.1
16
100
0
68
41
0
11
47
1.40
7666--7690
13
1.9
13
100
0
50
40
8
8
44
1.63
14624--14655
2
16.0
2
100
0
64
50
0
0
50
1.00
17528--17563
2
18.0
2
100
0
72
50
0
0
50
1.00
19658--19696
20
1.9
21
84
5
53
41
10
23
25
1.86
28947--29029
21
3.9
21
74
10
60
22
37
25
14
1.92
37310--37341
11
2.9
11
95
0
55
68
6
6
18
1.32
41787--41925
69
2.0
69
98
0
269
43
7
23
25
1.79
44800--44824
5
5.0
5
100
0
50
80
0
0
20
0.72
47499--47523
6
4.2
6
100
0
50
84
16
0
0
0.63
52038--52143
18
5.6
18
73
12
95
35
21
3
38
1.72
52038--52144
6
17.8
6
73
7
65
35
21
3
39
1.71
52073--52144
24
3.3
23
74
22
82
36
20
2
40
1.67
52038--52119
36
2.3
36
97
0
155
35
21
3
39
1.71
52038--52138
36
2.8
36
90
0
130
35
21
3
38
1.72
52285--52349
30
2.2
30
83
5
78
30
16
10
41
1.83
52412--52662
31
8.1
31
90
0
385
34
21
18
25
1.96
55038--55230
64
3.0
63
80
10
189
27
18
24
29
1.98

Tables:   1

The End!