Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001283.1 Hibiscus syriacus cultivar Beakdansim tig00002517_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94573

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4940--4969
5
6.0
5
92
0
51
20
3
0
76
0.92
7615--8084
233
2.0
234
97
1
888
28
17
20
34
1.95
10865--10897
15
2.1
16
88
5
50
57
21
0
21
1.41
12229--12263
18
1.9
18
100
0
70
28
25
22
22
1.99
12735--12775
20
2.0
20
95
0
73
53
24
4
17
1.63
12835--12901
33
2.0
33
91
0
107
31
25
14
28
1.95
14992--15181
95
2.0
95
90
2
301
33
16
24
25
1.96
15678--15960
46
6.0
46
90
2
395
46
10
20
21
1.80
15620--15960
26
14.5
25
71
21
156
47
10
20
21
1.80
17219--17250
12
2.7
12
90
0
55
40
9
31
18
1.83
23952--24009
29
2.0
29
96
0
107
50
13
12
24
1.76
28482--28538
29
2.0
29
100
0
114
47
14
14
24
1.80
33641--33713
18
3.9
18
82
7
101
28
31
19
20
1.97
33645--33719
38
2.0
38
94
0
132
30
29
18
21
1.97
42416--42482
26
2.6
26
97
0
125
43
8
0
47
1.34
42433--42474
13
3.1
14
73
13
52
42
9
0
47
1.36
45436--45477
3
13.3
3
90
9
66
61
0
0
38
0.96
45433--45480
10
4.6
10
90
10
78
62
0
0
37
0.95
45449--45492
20
2.2
20
87
0
61
68
0
0
31
0.90
45680--45986
130
2.3
134
82
8
344
26
18
28
27
1.98
46944--46978
18
1.9
18
88
11
54
5
17
0
77
0.96
46945--46998
16
3.5
15
77
7
54
7
11
0
81
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60275--60316
3
13.3
3
90
9
66
61
0
0
38
0.96
60272--60319
10
4.6
10
90
10
78
62
0
0
37
0.95
63296--63484
93
2.0
93
98
0
369
26
15
21
37
1.93
68352--68397
23
2.0
23
91
0
74
54
0
2
43
1.12
68662--68690
3
10.0
3
92
7
51
65
0
0
34
0.93
70027--70082
24
2.3
24
75
0
58
28
19
33
17
1.95
77257--77300
8
5.4
8
79
15
54
81
0
18
0
0.68
77241--77300
10
5.6
10
75
13
57
80
0
18
1
0.80
77241--77300
17
3.9
15
79
14
68
80
0
18
1
0.80
79398--79657
66
3.9
66
84
1
313
31
18
11
37
1.87
79408--79592
36
5.5
35
66
20
124
31
18
11
37
1.87
79402--79657
132
1.9
134
85
3
356
32
19
11
37
1.87
81352--81423
3
24.0
3
97
0
135
31
0
1
66
1.00
81894--81979
25
3.6
25
76
12
90
30
9
10
50
1.68
90604--90640
17
2.1
18
90
5
58
29
10
13
45
1.77
90619--90677
25
2.4
24
89
10
93
23
13
15
47
1.81
90620--90687
25
2.9
23
87
12
86
26
13
13
47
1.79
90621--90731
47
2.2
49
80
13
113
30
12
13
43
1.81
91463--91488
12
2.2
12
100
0
52
76
7
7
7
1.15
93474--93507
17
2.1
17
94
5
61
23
5
2
67
1.26
93513--93551
18
2.2
18
100
0
78
35
23
17
23
1.95

Tables:   1

The End!