Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001295.1 Hibiscus syriacus cultivar Beakdansim tig00002534_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65339

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4438--4490
22
2.3
23
81
15
65
26
9
0
64
1.24
4359--4497
55
2.5
56
76
13
135
25
6
0
67
1.19
4425--4513
17
4.9
17
72
12
61
23
7
0
68
1.15
4719--4764
17
2.8
17
90
3
67
10
4
6
78
1.08
11870--11919
24
2.0
25
88
7
75
54
28
10
8
1.62
16310--16415
45
2.4
44
90
4
176
33
8
16
40
1.79
17512--17617
45
2.4
44
90
4
176
40
16
8
33
1.79
26319--26489
59
2.9
56
79
7
180
40
6
20
32
1.78
30176--30276
47
2.1
50
90
5
163
26
10
19
42
1.84
39929--39963
13
2.7
13
86
0
52
82
0
11
5
0.82
39941--40049
27
4.1
26
68
13
71
70
0
20
9
1.14
39950--40054
17
6.2
17
75
16
85
68
0
20
10
1.19
41424--41797
51
7.1
51
89
5
487
28
14
27
29
1.96
41423--41861
55
8.3
55
89
2
428
28
15
26
28
1.96
51926--51959
13
2.6
13
100
0
68
17
52
17
11
1.73
55221--55252
15
2.1
16
94
5
57
6
25
18
50
1.70
56146--56189
13
3.5
13
93
6
81
18
50
18
13
1.79

Tables:   1

The End!