Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001299.1 Hibiscus syriacus cultivar Beakdansim tig00002538_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69476

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2583--2621
20
2.0
20
90
5
62
53
0
2
43
1.14
4358--4618
137
1.9
137
88
1
398
42
18
13
26
1.87
20490--20523
16
2.1
16
100
0
68
32
5
32
29
1.81
23279--23360
29
2.8
29
78
14
87
35
14
4
45
1.67
27079--27168
22
3.9
23
71
8
60
50
3
3
43
1.35
35462--35679
103
2.1
103
97
0
409
25
12
24
37
1.90
35703--35763
23
2.7
23
84
0
77
18
24
26
31
1.97
38848--38901
24
2.2
24
77
6
56
64
16
9
9
1.47
38833--38899
14
5.1
14
70
17
54
65
16
8
8
1.45
48724--48753
15
2.0
15
93
0
51
36
20
3
40
1.69
50130--50173
18
2.4
18
88
0
61
18
4
36
40
1.71
54985--55024
21
1.9
21
100
0
80
40
25
0
35
1.56

Tables:   1

The End!