Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001304.1 Hibiscus syriacus cultivar Beakdansim tig00002544_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57034

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3352--3399
15
3.0
16
81
6
53
16
27
0
56
1.41
5283--5330
15
3.0
16
81
6
53
16
27
0
56
1.41
7215--7262
15
3.0
16
81
6
53
16
27
0
56
1.41
18162--18212
20
2.6
20
93
3
86
33
11
7
47
1.69
33971--33996
10
2.6
10
100
0
52
38
30
11
19
1.87
35293--35329
5
7.4
5
90
9
58
81
0
18
0
0.70
35300--35329
9
3.2
9
95
4
51
80
0
20
0
0.72
42663--42815
79
1.9
79
84
2
200
33
13
22
30
1.92
54168--54216
21
2.3
21
96
0
89
14
20
20
44
1.86
56523--56576
25
2.2
26
90
6
85
9
12
12
64
1.49

Tables:   1

The End!