Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001308.1 Hibiscus syriacus cultivar Beakdansim tig00002550_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81385

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5881--5914
17
2.1
16
88
5
50
76
0
8
14
1.01
15717--16330
54
11.4
54
90
0
897
28
17
21
33
1.95
15858--15997
27
5.2
27
63
30
75
29
17
20
32
1.96
15981--16062
26
3.1
26
62
25
62
29
19
24
26
1.98
16209--16294
27
3.2
26
67
23
70
29
17
20
32
1.96
18520--18776
75
3.4
75
87
1
354
39
12
14
33
1.84
18751--18796
23
2.0
23
95
0
83
32
17
15
34
1.91
18830--19125
155
1.9
153
89
2
459
41
10
11
36
1.75
19312--19593
108
2.6
108
83
3
327
34
13
13
38
1.84
19436--19898
226
2.0
226
84
3
610
31
14
14
39
1.86
25636--25704
4
16.8
4
86
11
79
18
0
2
78
0.88
30247--30285
15
2.6
15
87
0
51
66
2
5
25
1.25
35437--35498
11
6.3
10
87
8
76
83
6
8
1
0.86
35445--35493
11
4.5
11
94
2
82
83
8
6
2
0.87
35473--35530
16
3.6
16
86
4
73
74
5
20
0
1.01
35437--35560
10
11.9
10
72
14
74
78
4
14
2
1.02
41165--41508
45
7.6
45
91
3
525
42
7
19
30
1.78
41412--41485
24
3.2
24
61
24
59
43
4
21
31
1.71
42029--42070
12
3.7
12
78
12
52
21
16
16
45
1.86
42804--42847
22
2.0
22
100
0
88
31
18
18
31
1.95
45286--45399
35
3.2
36
90
5
178
42
20
4
32
1.71
45337--45397
21
3.2
21
65
29
64
42
21
4
31
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49899--50007
35
3.0
36
86
5
148
44
17
4
33
1.69
49939--49999
21
3.2
21
63
29
55
42
18
3
36
1.66
50627--50761
60
2.2
60
80
7
141
30
21
3
44
1.69
50925--51042
60
2.0
62
83
9
156
43
4
19
33
1.70
66680--66750
29
2.4
30
76
2
72
43
8
15
32
1.77
69865--69918
20
2.6
20
80
11
56
29
11
22
37
1.89
71351--71428
5
15.0
5
75
12
68
74
1
1
23
0.97
71358--71428
16
4.5
17
76
15
64
76
1
1
21
0.95
71351--71428
31
2.5
31
81
8
86
74
1
1
23
0.97
71369--71435
35
2.0
34
88
5
100
73
0
0
26
0.84
72879--72918
21
1.9
21
89
0
62
12
7
35
45
1.70
73251--73376
3
39.7
3
80
10
135
57
0
2
38
1.17
73251--73376
13
10.4
13
78
15
128
57
0
2
38
1.17
73251--73371
16
7.4
16
82
11
140
57
0
2
38
1.18
73251--73377
22
5.7
23
81
10
122
57
0
2
39
1.17
75082--75116
10
3.5
10
92
0
52
5
8
0
85
0.73

Tables:   1

The End!