Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001309.1 Hibiscus syriacus cultivar Beakdansim tig00002551_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73905

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7620--7649
14
2.1
15
93
6
53
26
20
3
50
1.64
7920--7964
20
2.2
21
81
18
60
28
20
8
42
1.82
16849--16897
16
3.1
16
100
0
98
32
18
6
42
1.75
22537--22565
15
2.0
15
93
6
51
0
20
3
75
0.94
22558--22619
27
2.2
28
78
13
74
11
17
11
59
1.60
25189--25250
27
2.2
28
78
13
74
11
17
11
59
1.60
31687--31733
23
2.0
23
87
0
67
34
19
6
40
1.77
48025--48150
47
2.8
44
82
8
144
31
22
7
38
1.83
48254--48375
40
3.0
40
97
0
226
33
27
15
23
1.95
52153--52184
16
1.9
17
93
6
57
87
0
9
3
0.64
56406--56432
14
1.9
14
100
0
54
3
7
7
81
0.97
58710--58760
20
2.6
19
84
3
66
35
11
5
47
1.65
59547--59580
16
2.1
16
89
10
52
82
0
17
0
0.67
59550--59583
11
3.0
11
91
4
50
82
0
17
0
0.67
59609--59650
18
2.4
18
80
11
52
76
2
19
2
1.01
65530--65564
14
2.5
14
100
0
70
34
11
25
28
1.91
69906--69951
19
2.3
20
85
3
58
34
15
6
43
1.72
70297--70412
35
3.3
35
91
1
178
28
35
2
33
1.71
70296--70394
13
8.3
12
71
21
66
28
35
2
34
1.69

Tables:   1

The End!