Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001310.1 Hibiscus syriacus cultivar Beakdansim tig00002553_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68031

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9479--9549
29
2.4
30
76
2
72
43
8
15
32
1.77
12658--12711
20
2.6
20
80
11
56
29
11
22
37
1.89
14134--14211
5
15.0
5
75
12
68
74
1
1
23
0.97
14141--14211
16
4.5
17
76
15
64
76
1
1
21
0.95
14134--14211
31
2.5
31
81
8
86
74
1
1
23
0.97
14152--14218
35
2.0
34
88
5
100
73
0
0
26
0.84
16029--16156
3
40.7
3
82
9
148
58
0
2
38
1.16
16024--16153
10
12.0
11
76
18
64
57
0
2
39
1.17
16041--16156
35
3.3
35
86
7
155
58
0
1
38
1.14
17862--17898
11
3.4
11
92
0
56
5
8
0
86
0.70
23405--23447
21
2.0
21
81
0
50
30
30
25
13
1.94
23990--24293
149
2.0
149
96
0
554
26
15
21
36
1.93
24272--24316
23
2.0
23
86
0
63
20
24
28
26
1.99
31119--31157
11
3.5
11
83
16
53
79
0
2
17
0.84
31119--31155
18
2.1
18
90
5
58
81
0
2
16
0.81
33016--33190
90
2.0
90
91
1
289
45
6
11
36
1.67
34493--34601
10
11.2
10
70
8
64
54
1
4
39
1.32
34496--34601
13
8.4
13
66
21
64
53
1
4
39
1.33
34493--34580
16
5.2
16
74
14
70
55
2
3
38
1.29
34477--34580
3
32.7
3
76
11
64
54
1
5
37
1.35
43498--43642
61
2.3
64
88
8
217
27
25
17
29
1.97
47085--47189
37
2.9
37
88
6
146
14
6
37
41
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47093--47189
34
2.7
37
89
7
139
14
7
35
43
1.73
47772--47818
18
2.7
18
93
3
78
29
31
6
31
1.83
60006--60045
21
1.9
21
89
0
62
37
15
12
35
1.85

Tables:   1

The End!