Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001312.1 Hibiscus syriacus cultivar Beakdansim tig00002557_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45274

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21050--21260
77
2.8
74
79
11
205
25
21
6
46
1.74
23279--23310
16
2.0
16
93
0
55
34
0
0
65
0.93
23577--23697
29
4.1
29
79
5
118
37
8
2
52
1.45
23749--23859
24
4.3
26
74
18
97
54
0
8
36
1.36
23745--24035
30
10.1
29
76
10
210
51
1
9
37
1.44
23749--23859
54
2.1
51
84
12
138
54
0
8
36
1.36
26337--26379
2
21.5
2
95
0
77
51
0
0
48
1.00
28083--28169
32
2.8
32
87
5
124
20
12
28
37
1.89
33788--33834
22
2.1
22
100
0
94
36
8
27
27
1.86
37869--37899
16
1.9
16
93
0
53
6
3
48
41
1.45
42314--42496
54
3.4
54
93
0
294
38
18
13
29
1.89

Tables:   1

The End!