Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001313.1 Hibiscus syriacus cultivar Beakdansim tig00002559_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75694

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4484--4530
19
2.4
19
82
10
60
12
21
10
55
1.67
5370--5401
16
2.0
16
93
0
55
84
0
6
9
0.78
23461--23500
21
1.9
21
85
10
55
75
0
10
15
1.05
24539--24618
40
2.0
40
86
9
112
56
7
5
31
1.49
25022--25087
2
33.5
2
96
3
125
51
0
0
48
1.00
25548--25619
35
2.1
35
100
0
144
27
20
11
40
1.87
26342--26394
23
2.2
24
83
3
63
58
22
9
9
1.58
26597--26642
24
1.9
24
86
0
65
60
17
8
13
1.56
30875--30956
29
2.8
29
94
1
137
32
14
9
42
1.79
35634--35715
29
2.8
29
94
1
137
32
14
9
42
1.79
42106--42152
20
2.3
20
100
0
94
8
19
17
55
1.67
55202--55267
30
2.2
30
82
12
75
31
7
21
39
1.81
55877--55902
2
13.0
2
100
0
52
50
0
0
50
1.00
69875--69920
2
23.0
2
100
0
92
50
0
0
50
1.00
70277--70317
20
2.0
20
85
0
55
24
19
34
21
1.97
73007--73055
25
2.0
25
84
15
66
38
0
4
57
1.18

Tables:   1

The End!