Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001321.1 Hibiscus syriacus cultivar Beakdansim tig00002575_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59754

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8580--8734
53
3.2
46
81
12
186
43
19
10
26
1.84
17681--17720
21
1.9
21
89
0
62
25
40
25
10
1.86
24319--24427
35
3.1
35
68
22
91
34
21
14
29
1.93
24327--24444
38
3.2
36
72
20
102
34
22
13
28
1.92
32659--32745
32
2.8
32
75
15
90
33
17
16
33
1.92
32660--32765
31
3.4
31
79
8
99
31
16
17
33
1.93
34989--35100
35
3.1
35
63
22
88
35
22
12
29
1.91
35086--35151
33
2.0
34
90
3
107
37
22
15
24
1.92
37454--37491
20
1.9
20
94
0
67
36
26
28
7
1.84
37455--37499
20
2.2
20
88
0
63
40
28
24
6
1.80
44471--44621
72
2.1
72
97
0
284
29
25
17
28
1.97

Tables:   1

The End!