Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001336.1 Hibiscus syriacus cultivar Beakdansim tig00002610_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57127

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19831--19876
24
1.9
24
82
8
58
8
8
4
78
1.09
20166--20228
21
3.0
22
84
9
78
41
0
31
26
1.56
20952--20994
10
3.9
10
78
21
50
60
25
9
4
1.47
20951--21011
24
2.5
24
100
0
122
59
24
8
8
1.54
20951--21021
14
5.8
13
76
23
66
59
23
8
8
1.54
21455--21510
25
2.2
25
100
0
112
35
25
19
19
1.95
22097--22126
2
15.0
2
100
0
60
50
0
0
50
1.00
23212--23247
15
2.4
15
90
0
54
11
66
16
5
1.40
28855--28891
12
3.0
12
92
4
56
18
54
16
10
1.71
28920--28976
24
2.3
26
77
20
68
56
0
0
43
0.99
28938--28977
19
2.1
19
85
0
53
55
0
0
45
0.99
28976--29029
12
4.6
12
79
4
65
25
48
14
11
1.77
29596--29742
76
1.9
75
85
8
199
25
10
12
51
1.73
52899--52929
16
1.9
16
93
0
53
48
19
12
19
1.81

Tables:   1

The End!