Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001350.1 Hibiscus syriacus cultivar Beakdansim tig00002631_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43304

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6414--6505
24
3.8
24
83
0
94
53
14
11
20
1.72
6411--6495
12
7.1
12
69
14
50
52
14
12
20
1.73
7987--8016
10
2.9
10
95
5
51
20
30
36
13
1.90
10156--10245
24
3.8
24
84
0
99
55
13
11
20
1.68
10155--10255
24
4.2
24
82
3
87
55
11
12
19
1.68
11724--11756
17
2.0
17
88
5
50
27
30
27
15
1.96
20543--20627
34
2.6
34
69
10
86
47
7
14
31
1.71
20629--20682
25
2.2
25
100
0
108
37
7
24
31
1.83
29287--29403
60
2.0
60
86
1
164
36
7
17
37
1.79
31343--31500
63
2.5
64
81
7
162
31
21
19
27
1.97
32066--32156
18
4.9
18
81
5
92
19
15
31
32
1.93
37927--37968
19
2.3
18
84
12
50
38
4
19
38
1.73
38297--38436
64
2.2
64
81
7
151
33
20
18
27
1.96
39313--39345
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!