Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000137.1 Hibiscus syriacus cultivar Beakdansim tig00000250_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61647

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1311--2183
437
2.0
434
95
1
1570
28
23
15
31
1.95
3531--3849
127
2.5
127
83
4
385
27
19
26
26
1.99
3990--4114
35
3.8
34
75
13
118
35
12
21
31
1.90
4225--4304
33
2.4
34
81
4
92
37
13
17
31
1.89
4622--4688
34
2.0
34
90
0
107
34
10
20
34
1.87
6065--6093
2
14.5
2
100
0
58
0
0
48
51
1.00
9923--9960
17
2.2
18
86
9
53
60
7
5
26
1.46
10198--10312
30
3.9
29
75
8
97
57
9
13
20
1.63
10858--10903
21
2.2
21
100
0
92
52
8
15
23
1.70
11824--12193
128
2.9
126
83
4
431
25
17
30
26
1.97
12081--12198
41
2.9
40
79
3
137
22
17
33
25
1.96
12090--12200
40
2.7
41
85
1
143
20
18
35
25
1.96
12309--12408
35
2.9
34
81
8
123
37
13
19
31
1.89
19784--19813
4
7.5
4
100
0
60
0
23
0
76
0.78
21365--21425
19
3.4
17
76
10
59
78
4
6
9
1.07
21481--21524
17
2.7
15
83
16
52
79
0
6
13
0.92
21481--21524
18
2.6
16
82
7
52
79
0
6
13
0.92
21621--21645
13
1.9
13
100
0
50
80
0
8
12
0.92
21626--21682
16
3.2
18
73
12
55
73
0
3
22
0.98
21799--21847
25
2.0
25
84
8
64
57
0
4
38
1.18
21793--21856
25
2.6
25
79
11
62
57
1
3
37
1.24
32844--33447
302
2.0
302
99
0
1181
40
11
16
32
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33560--33937
110
3.2
124
79
7
367
34
15
15
33
1.90
33613--34035
232
1.8
231
82
3
544
33
14
16
35
1.89
35577--35675
51
1.9
51
95
0
180
30
10
20
39
1.85
37015--37058
2
22.0
2
100
0
88
50
0
0
50
1.00
39101--39125
4
6.2
4
100
0
50
24
0
24
52
1.48
43093--43130
6
6.3
6
93
0
58
34
5
15
44
1.69
47640--47703
27
2.4
27
89
5
94
37
15
9
37
1.80
49006--49078
30
2.4
30
82
11
87
38
10
8
42
1.70
50231--50373
60
2.4
59
80
10
164
29
20
17
32
1.95
59956--60187
115
2.0
113
92
4
387
28
11
14
45
1.80

Tables:   1

The End!