Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001370.1 Hibiscus syriacus cultivar Beakdansim tig00002682_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36665

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--592
26
2.2
25
85
14
73
38
7
21
33
1.80
11539--11579
3
13.7
3
85
10
57
63
2
0
34
1.08
11815--11898
40
2.2
39
89
4
125
48
14
2
34
1.56
12748--12781
15
2.3
15
94
0
59
47
17
0
35
1.48
12981--13116
72
1.9
72
87
0
200
48
9
13
28
1.73
18859--18887
2
14.5
2
100
0
58
51
0
0
48
1.00
20046--20075
2
15.0
2
100
0
60
50
0
0
50
1.00
22937--23043
3
35.7
3
88
0
160
64
0
1
33
1.04
23291--24137
113
7.5
113
97
1
1560
28
19
14
37
1.91
24805--24945
52
2.7
52
100
0
282
38
24
14
22
1.92
24726--25139
182
2.3
182
98
0
801
36
22
14
26
1.93
24987--25127
52
2.7
52
100
0
282
38
24
14
22
1.92
26290--26368
16
5.0
15
79
15
88
2
16
0
81
0.81
26280--26368
5
17.2
5
74
19
76
2
16
0
80
0.80
26279--26355
14
5.4
14
76
18
79
2
18
0
79
0.85
26280--26368
42
2.1
42
86
10
121
2
16
0
80
0.80

Tables:   1

The End!