Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001380.1 Hibiscus syriacus cultivar Beakdansim tig00002693_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43202

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--174
45
3.2
45
88
2
193
46
6
33
13
1.69
873--901
2
14.5
2
100
0
58
51
0
0
48
1.00
16106--16157
19
2.7
19
93
0
86
34
15
28
21
1.94
16047--16223
83
2.1
82
83
8
225
33
18
25
22
1.96
17982--18020
20
1.9
20
89
5
60
38
28
15
17
1.91
19241--19280
15
2.7
15
88
3
55
67
2
30
0
1.04
21483--21522
20
2.0
21
85
5
55
37
27
15
20
1.92
24582--24939
176
2.0
177
97
0
673
37
18
22
21
1.94
26960--27010
20
2.5
20
96
0
93
33
19
9
37
1.85
29033--29072
20
2.0
20
90
5
62
35
32
15
17
1.91
35708--35741
17
2.1
17
88
5
52
35
14
17
32
1.91
41498--41628
47
2.7
49
81
7
142
17
33
27
21
1.96
42375--42407
17
1.9
17
88
11
50
27
3
6
63
1.32
42855--43097
125
1.9
130
89
5
381
34
13
15
36
1.86

Tables:   1

The End!