Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001385.1 Hibiscus syriacus cultivar Beakdansim tig00002703_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48755

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9283--9420
36
3.9
36
92
0
224
25
15
15
43
1.86
11973--12012
13
3.0
13
85
7
53
32
2
2
62
1.22
12350--12379
15
2.0
15
93
0
51
30
0
0
70
0.88
12073--12468
141
2.8
142
79
9
325
38
7
8
45
1.61
14124--14154
14
2.2
14
94
0
53
16
19
6
58
1.59
19959--20137
75
2.4
75
82
0
223
31
14
22
31
1.94
20998--21246
54
4.6
54
87
1
304
36
13
23
26
1.92
20998--21246
108
2.3
108
88
0
365
36
13
23
26
1.92
21610--21707
22
4.5
22
94
0
160
34
16
12
36
1.86
22378--22602
45
5.0
45
95
1
378
24
23
20
31
1.98
22535--22676
76
1.9
74
91
2
230
23
21
21
33
1.97
22611--22758
45
3.3
45
86
0
206
25
21
19
33
1.97
22490--22720
121
1.9
119
91
1
381
22
22
20
34
1.97
22446--22758
166
1.9
166
91
0
509
24
22
19
33
1.97
24787--24854
26
2.7
25
75
8
66
61
5
8
23
1.47
36625--36952
92
3.7
89
87
2
374
31
24
22
21
1.98
36591--36952
91
4.0
91
85
3
401
31
24
22
20
1.98
37293--37322
15
2.0
15
93
0
51
56
16
0
26
1.40
39660--39691
17
1.9
16
93
6
55
31
25
31
12
1.92
41712--42011
92
3.3
88
81
6
318
30
23
23
22
1.99
41761--42048
92
3.2
92
84
2
341
31
24
21
22
1.98
42585--42617
16
2.1
16
94
0
57
51
12
21
15
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44550--44617
23
3.0
23
84
0
91
17
26
26
29
1.98
48110--48146
17
2.2
18
85
9
51
24
0
21
54
1.45

Tables:   1

The End!