Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001393.1 Hibiscus syriacus cultivar Beakdansim tig00002718_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53192

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8006--8042
19
1.9
19
88
0
56
32
24
5
37
1.78
8685--8759
31
2.4
31
97
0
141
25
2
18
53
1.58
14731--14851
54
2.2
54
89
0
179
32
28
18
21
1.96
14838--14874
20
1.9
19
89
10
58
24
32
21
21
1.98
20611--20668
23
2.7
21
79
10
71
27
27
12
32
1.92
20611--20687
23
3.7
20
79
8
66
28
27
14
29
1.95
20610--20691
21
3.8
22
73
9
62
28
26
14
30
1.95
22611--22645
18
2.0
17
94
5
61
20
0
22
57
1.41
22625--22681
26
2.3
25
82
14
66
15
0
22
61
1.34
22730--22760
16
1.9
16
93
0
53
29
16
3
51
1.59
23308--23429
54
2.3
54
91
0
190
34
25
18
22
1.96
23415--23450
19
1.9
19
94
5
65
25
30
22
22
1.99
29600--29663
24
2.5
26
78
12
62
25
1
6
67
1.23
31157--31191
18
2.0
17
94
5
61
20
0
22
57
1.41
31277--31307
16
1.9
16
93
0
53
29
16
3
51
1.59
31854--31975
54
2.3
54
91
0
190
34
25
18
22
1.96
31961--31996
19
1.9
19
94
5
65
25
30
22
22
1.99
34785--34815
16
1.9
16
93
0
53
35
19
16
29
1.93
48454--48777
54
6.0
54
90
0
495
31
20
19
28
1.97
49111--49324
94
2.3
95
82
5
265
24
24
17
33
1.96

Tables:   1

The End!