Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001403.1 Hibiscus syriacus cultivar Beakdansim tig00002739_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59558

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1090--1115
7
3.7
7
100
0
52
42
11
0
46
1.40
1913--2526
305
2.0
304
90
6
969
45
18
16
19
1.86
4081--4113
9
3.3
10
87
12
50
54
0
0
45
0.99
4630--4699
27
2.6
27
81
4
79
32
11
2
52
1.52
7458--7504
24
2.0
24
100
0
94
38
4
19
38
1.71
14193--14243
20
2.5
20
100
0
102
23
27
19
29
1.98
30341--30400
22
2.7
22
92
0
102
33
21
16
28
1.95
40699--40896
97
2.0
97
88
0
288
42
16
15
26
1.87
41211--41586
205
1.8
206
85
3
533
42
8
12
35
1.74
43852--43892
21
2.0
21
85
9
57
29
2
21
46
1.64
56869--57021
77
2.0
78
82
12
190
43
9
5
41
1.59
58225--58262
3
12.3
3
88
5
58
31
2
0
65
1.06
58218--58267
22
2.3
22
86
3
75
28
2
0
70
0.99
58228--58266
19
2.1
18
90
4
60
30
2
0
66
1.05
59463--59512
22
2.3
22
79
6
57
66
0
6
28
1.15

Tables:   1

The End!