Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001408.1 Hibiscus syriacus cultivar Beakdansim tig00002745_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73804

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6286--6671
185
2.1
182
86
5
537
42
3
8
46
1.51
20772--20851
27
2.9
28
85
5
108
17
15
13
53
1.73
20772--20851
29
2.9
28
86
3
108
17
15
13
53
1.73
25783--25955
87
2.0
84
87
3
247
26
20
24
28
1.99
25783--25955
42
4.0
42
85
4
229
26
20
24
28
1.99
30677--30707
16
1.9
16
93
0
53
48
3
16
32
1.62
31819--31879
30
2.0
30
84
6
79
45
11
13
29
1.78
42062--42237
58
3.0
58
82
6
201
32
21
5
41
1.75
42097--42189
29
3.2
29
67
15
75
33
21
4
40
1.73
42098--42240
60
2.4
58
85
6
173
32
20
5
41
1.76
42370--42560
60
3.2
60
73
5
154
41
5
20
32
1.75
55078--55133
25
2.1
28
83
9
73
41
10
7
41
1.67
55106--55196
30
2.9
30
76
7
83
39
12
8
39
1.74
64112--64140
2
15.0
2
92
7
51
51
0
0
48
1.00
64112--64137
13
2.0
13
100
0
52
53
0
0
46
1.00

Tables:   1

The End!