Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001417.1 Hibiscus syriacus cultivar Beakdansim tig00002754_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68089

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3218--3247
14
2.1
14
93
0
51
56
0
0
43
0.99
11105--11133
2
14.5
2
100
0
58
51
0
0
48
1.00
11488--11878
185
2.1
186
88
2
583
46
7
3
42
1.50
19134--19209
2
38.5
2
97
2
145
50
0
0
50
1.00
23629--23805
89
2.0
89
86
4
250
46
6
8
38
1.59
30109--30161
22
2.5
21
90
3
79
52
5
3
37
1.43
31454--31494
19
2.2
18
86
4
55
41
7
24
26
1.81
33619--33675
25
2.3
26
85
8
75
64
1
0
33
1.04
34890--34944
12
4.6
12
83
0
74
12
16
47
23
1.81
35049--35100
13
4.5
13
73
24
53
15
15
50
19
1.79
35055--35113
21
2.9
21
94
2
102
15
13
50
20
1.77
36250--36311
31
2.2
28
78
16
65
30
27
22
19
1.98
40122--40235
60
1.9
60
83
3
149
34
23
5
36
1.78
41443--41501
18
3.1
18
83
11
73
59
0
1
38
1.08
45126--45201
36
2.1
36
82
7
91
46
1
3
48
1.29
53500--53564
32
2.0
32
93
0
112
44
12
20
23
1.84

Tables:   1

The End!