Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001425.1 Hibiscus syriacus cultivar Beakdansim tig00002768_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95702

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
799--871
23
3.2
23
88
0
101
34
4
21
39
1.73
1955--2029
29
2.6
28
83
8
89
37
6
10
45
1.65
3392--3479
44
2.2
39
88
12
124
20
21
22
35
1.96
3400--3668
63
4.3
61
77
12
258
20
20
24
34
1.96
3408--3702
84
3.5
82
86
6
371
20
20
24
34
1.96
3448--3693
42
5.9
42
91
0
397
19
19
25
35
1.95
4455--4486
6
5.5
6
96
3
57
0
15
53
31
1.43
6371--6408
19
2.0
19
94
0
67
44
0
13
42
1.43
24371--24410
21
1.9
21
89
0
62
27
0
2
70
1.01
33607--33659
21
2.5
21
93
0
88
28
28
22
20
1.99
33852--33883
13
2.5
13
94
0
55
43
9
3
43
1.52
33894--33992
33
3.0
33
94
1
164
45
15
7
32
1.73
33987--34026
21
1.9
21
94
0
71
47
7
15
30
1.72
44360--44522
78
2.1
78
82
4
193
23
24
17
34
1.96
48689--48732
21
2.1
21
82
0
52
54
11
9
25
1.65
58371--58396
11
2.4
11
100
0
52
38
0
0
61
0.96
62419--62448
15
1.9
15
93
6
51
6
30
20
43
1.77
63010--63043
13
2.5
14
85
4
52
67
0
0
32
0.91
70064--70105
22
1.9
22
100
0
84
16
33
23
26
1.96
70112--70204
31
3.0
31
92
6
161
24
38
12
23
1.90
80775--80817
21
2.0
22
81
9
52
55
23
2
18
1.54
83605--83640
3
12.0
3
100
0
72
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83720--83757
2
19.0
2
100
0
76
50
0
0
50
1.00
91960--92012
2
26.5
2
100
0
106
50
49
0
0
1.00
92012--92036
2
12.5
2
100
0
50
52
0
0
48
1.00
92197--92294
24
4.1
24
88
5
90
36
21
17
24
1.94
92207--92295
24
3.7
24
90
3
135
33
21
19
25
1.97

Tables:   1

The End!