Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001429.1 Hibiscus syriacus cultivar Beakdansim tig00002775_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48721

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13701--13745
21
2.1
21
84
8
56
44
6
13
35
1.70
16236--16294
26
2.3
25
85
11
75
25
5
25
44
1.74
22226--22258
14
2.4
14
94
0
57
24
39
30
6
1.79
22241--22299
23
2.6
23
91
0
91
25
27
35
11
1.91
22318--22402
29
2.9
29
94
0
143
22
30
35
11
1.90
22431--22455
12
2.1
12
100
0
50
16
36
8
40
1.77
31126--31226
41
2.5
41
86
0
148
20
17
20
40
1.91
31236--31323
19
4.5
19
80
8
113
19
20
20
39
1.92
32083--32196
20
5.6
20
85
2
111
37
24
21
15
1.93
32125--32215
21
4.4
21
83
2
130
31
28
17
21
1.96
32080--32221
41
3.5
41
77
3
160
37
24
19
18
1.94
32080--32225
21
7.1
21
79
3
118
37
25
19
17
1.93
32628--32667
2
20.0
2
100
0
80
50
0
0
50
1.00
42138--42167
15
2.0
15
93
0
51
63
0
3
33
1.11
48096--48145
25
2.0
25
92
0
82
32
28
8
32
1.86

Tables:   1

The End!