Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001432.1 Hibiscus syriacus cultivar Beakdansim tig00002780_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  127402

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12822--12900
31
2.5
31
86
9
108
25
13
6
54
1.63
14019--14058
20
2.0
21
85
5
55
57
5
30
7
1.48
19046--19097
2
25.5
2
96
3
95
48
0
1
50
1.12
20437--20484
13
3.7
13
85
0
69
31
18
14
35
1.91
20668--20696
2
14.5
2
100
0
58
48
0
0
51
1.00
25381--25414
17
2.1
17
88
5
52
32
23
5
38
1.79
26911--26954
21
2.1
21
100
0
88
18
4
31
45
1.69
28815--28863
19
2.6
18
81
9
62
73
2
4
20
1.10
29023--29084
32
1.9
32
84
12
83
62
11
0
25
1.28
29054--29186
44
3.3
44
64
28
103
56
15
0
27
1.44
28990--29219
76
3.0
74
88
4
318
56
13
0
30
1.40
31612--31653
20
2.0
21
90
4
68
40
9
14
35
1.78
36272--36313
20
2.0
21
90
4
68
40
9
14
35
1.78
47183--47208
6
4.3
6
100
0
52
38
0
30
30
1.58
48151--48266
60
1.9
60
84
3
153
36
11
18
34
1.86
64417--64747
156
2.1
155
84
3
414
48
4
17
30
1.66
64814--64876
32
2.0
32
93
0
108
38
11
3
47
1.55
65764--65789
13
2.0
13
100
0
52
46
7
7
38
1.61
66287--66347
27
2.2
28
94
2
106
45
6
21
26
1.76
77914--77962
15
3.1
15
80
8
62
48
0
0
51
1.00
83880--83949
14
5.1
13
70
23
54
61
17
11
10
1.56
83879--83949
28
2.6
27
95
2
124
60
18
11
9
1.57
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107749--107787
17
2.3
17
100
0
78
61
5
12
20
1.50
108376--108452
35
2.2
35
100
0
154
49
20
15
14
1.79
112806--112887
37
2.2
38
84
2
103
51
4
9
34
1.56
115871--115915
21
2.2
20
84
4
54
46
0
6
46
1.29
118308--118340
15
2.3
15
89
5
50
27
3
0
69
1.03

Tables:   1

The End!