Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000144.1 Hibiscus syriacus cultivar Beakdansim tig00000259_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63400

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2497--2544
18
2.7
17
75
9
51
43
2
0
54
1.12
2489--2552
28
2.3
29
82
10
82
46
1
0
51
1.10
2491--2672
93
1.9
95
79
13
207
46
1
1
51
1.18
4261--4293
17
2.0
17
94
5
59
48
12
24
15
1.78
15449--15487
16
2.4
16
91
0
60
20
28
17
33
1.96
16852--16905
22
2.3
23
84
9
74
51
1
0
46
1.11
16937--17140
33
6.6
30
68
18
86
46
5
8
39
1.58
16958--17100
33
4.5
33
69
20
108
42
6
9
40
1.65
16937--17051
57
2.1
54
90
6
178
47
6
7
38
1.57
16986--17030
24
2.0
24
86
8
67
51
6
2
40
1.41
16989--17140
33
4.6
33
74
16
125
46
5
7
40
1.57
17091--17164
20
3.5
20
77
16
85
52
1
6
39
1.36
17091--17151
23
2.7
23
79
16
74
54
1
6
37
1.37
17104--17153
13
3.8
13
77
17
59
54
2
6
38
1.37
17120--17188
29
2.4
29
80
11
79
53
0
7
39
1.29
17174--17232
7
8.7
7
79
1
50
55
18
0
25
1.42
17175--17232
21
2.9
21
87
5
84
55
18
0
25
1.43
17283--17415
26
5.3
24
70
20
87
46
3
3
46
1.36
17335--17416
11
7.8
10
70
22
53
47
2
2
47
1.28
17434--17468
17
2.1
17
100
0
70
54
0
0
45
0.99
17483--17539
27
2.2
26
87
9
80
54
19
0
26
1.44
17489--17560
20
3.5
20
81
9
67
51
25
1
22
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17562--18064
215
2.3
215
95
0
891
29
11
7
50
1.67
25833--25872
21
1.9
21
85
10
55
35
10
2
52
1.48
37354--37627
136
2.0
136
97
0
512
27
23
26
22
2.00
38326--38360
17
2.1
17
100
0
70
37
17
11
34
1.85
44332--44376
17
2.6
17
96
0
81
6
33
4
55
1.46
44368--44401
13
2.6
13
95
0
59
8
14
0
76
1.01
44985--45057
13
5.3
13
68
22
51
19
10
0
69
1.17
45020--45053
17
2.0
17
88
11
52
23
2
0
73
0.97
49070--49135
31
2.2
30
81
10
80
30
19
18
31
1.96
49124--49246
30
4.1
30
95
1
212
21
21
26
30
1.98
53448--53513
31
2.2
30
81
10
80
30
19
18
31
1.96
53502--53624
30
4.1
30
95
1
212
21
21
26
30
1.98
57817--57864
13
3.7
13
86
5
62
10
12
2
75
1.14
61572--61617
9
5.3
9
82
7
60
58
0
2
39
1.10

Tables:   1

The End!