Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001450.1 Hibiscus syriacus cultivar Beakdansim tig00002802_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55920

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3617--3692
38
2.0
39
89
5
120
35
0
13
51
1.41
4863--4922
28
2.2
27
82
5
77
38
18
0
43
1.50
11465--11521
21
2.7
21
94
0
96
24
21
24
29
1.99
12043--12071
14
2.1
14
93
6
51
24
0
6
68
1.13
14079--14111
2
16.5
2
100
0
66
48
0
0
51
1.00
15044--15069
2
13.0
2
100
0
52
50
0
0
50
1.00
15242--15303
2
31.0
2
100
0
124
50
0
0
50
1.00
17786--17828
23
1.9
22
90
4
68
72
2
0
25
0.97
20290--20355
32
2.1
32
85
0
87
37
13
33
15
1.86
40553--40629
33
2.4
32
89
4
127
44
15
9
31
1.78
40618--40659
21
2.0
21
100
0
84
47
9
14
28
1.75

Tables:   1

The End!